PAN3

Protein-coding gene in the species Homo sapiens
PAN3
Identifiers
AliasesPAN3, PAN3 poly(A) specific ribonuclease subunit, poly(A) specific ribonuclease subunit PAN3
External IDsOMIM: 617448; MGI: 1919837; HomoloGene: 6372; GeneCards: PAN3; OMA:PAN3 - orthologs
Gene location (Human)
Chromosome 13 (human)
Chr.Chromosome 13 (human)[1]
Chromosome 13 (human)
Genomic location for PAN3
Genomic location for PAN3
Band13q12.2Start28,138,506 bp[1]
End28,295,335 bp[1]
Gene location (Mouse)
Chromosome 5 (mouse)
Chr.Chromosome 5 (mouse)[2]
Chromosome 5 (mouse)
Genomic location for PAN3
Genomic location for PAN3
Band5|5 G3Start147,366,971 bp[2]
End147,485,312 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • pancreatic ductal cell

  • secondary oocyte

  • thymus

  • trabecular bone

  • epithelium of nasopharynx

  • cerebellar vermis

  • skin of arm

  • mucosa of ileum

  • germinal epithelium

  • corpus epididymis
Top expressed in
  • zygote

  • secondary oocyte

  • genital tubercle

  • tail of embryo

  • spermatid

  • thymus

  • cerebellar cortex

  • spermatocyte

  • lobe of cerebellum

  • neural layer of retina
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • poly(A)-specific ribonuclease activity
  • protein kinase activity
  • nucleotide binding
  • protein binding
  • ATP binding
  • metal ion binding
  • RNA binding
Cellular component
  • cytoplasm
  • cytosol
  • PAN complex
  • P-body
Biological process
  • protein phosphorylation
  • protein targeting
  • mRNA processing
  • RNA phosphodiester bond hydrolysis, exonucleolytic
  • nuclear-transcribed mRNA poly(A) tail shortening
  • deadenylation-dependent decapping of nuclear-transcribed mRNA
  • positive regulation of cytoplasmic mRNA processing body assembly
  • nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

255967

72587

Ensembl

ENSG00000152520

ENSMUSG00000029647

UniProt

Q58A45

Q640Q5

RefSeq (mRNA)

NM_175854

NM_028291
NM_001359433

RefSeq (protein)

NP_787050

NP_082567
NP_001346362

Location (UCSC)Chr 13: 28.14 – 28.3 MbChr 5: 147.37 – 147.49 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

PAN3 poly(A) specific ribonuclease subunit is a protein that in humans is encoded by the PAN3 gene. [5]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000152520 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000029647 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Entrez Gene: PAN3 poly(A) specific ribonuclease subunit". Retrieved 2016-09-27.

Further reading

  • Uchida N, Hoshino S, Katada T (2004). "Identification of a human cytoplasmic poly(A) nuclease complex stimulated by poly(A)-binding protein". J. Biol. Chem. 279 (2): 1383–91. doi:10.1074/jbc.M309125200. PMID 14583602.


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